Utilities For Organic Chemistry 12B

Web Sites

Find 1H NMR, 13C NMR, IR, Mass Spec by compound search

Peak Finder for 13C NMR, 1H NMR, Mass spectrocsopy, IR

IR Analyzer 

TelSpec IR Simulator generates an IR for known compounds

Compound identification by physical property

Chemical drawing, IR, and Raman spectral analysis software. Process IR, NMR and Raman spectra to access the Sadtler spectroscopy handbooks and generate high-quality laboratory reports. Free software. File size is 55 MB.

Bio-macromolecules, Proteins, DNA, RNA, and Enzyme structures

Beowulf Cluster molecular model rendering via super computer

Organic Syntheses determines reactants, products, reagents, and conditions for organic reactions using structures and words to describe reactions.

Organic Reactions Roadmap An excellent roadmap showing many pertinent reactions needed for completing organic synthesis. 

Waltz Molecular Modeling: Draw molecules using Nanocad, minmize energy, export as .xyz or .pdb and import those molecules into the Waltz supercomputer to determine electrons density maps or molecular orbitals and view a VRML representation of the output.

Data Bases

Bioactive small molecules database

Programs

ISIS/Draw enables you to electronically draw and insert molecular structures into documents, Web pages, spreadsheets, and presentations. It has a feature that will automatically name compounds you draw. 

ViewerLite 5 (5.4 MB) is for analyzing 3-D molecular models. From small molecules to DNA structures. It is excellent at determining the electrostatic potential for a molecule and gives beautiful structural depictions of molecules. This program completely compatible with Isis Draw for quick input or output of structures. Also allows you to save files in several different formats. Just run the installation program to install. 

RasMol (.5 MB) is for analyzing 3-D molecular models. From small molecules to DNA structures. The program also has the help files (rasmol.hlp and raswin.hlp) that need to be placed in the same folder as the raswin.exe file. Try a right click on these links and "Save target as" to save these files.